Package index • rdiversity

All functions
`chainsaw()`	Function to cut the phylogeny to a specified depth from the tip with the greatest distance from the root.
`dist2sim()`	Distance to similarity
`show(<distance>)`	distance-class
`distance()`	Generate distance object
`gen2dist()`	Genetic distance matrix
`inddiv()`	Calculate individual-level diversity
`meta_gamma()`	Metacommunity gamma diversity
`show(<metacommunity>)`	metacommunity-class
`metacommunity()`	Metacommunity
`metadiv()`	Metacommunity-level diversity
`norm_alpha()`	Normalised alpha (low level diversity component)
`norm_beta()`	Normalised beta (low level diversity component)
`norm_meta_alpha()`	Normalised metacommunity alpha diversity
`norm_meta_beta()`	Normalised metacommunity beta diversity
`norm_meta_rho()`	Normalised metacommunity rho diversity
`norm_rho()`	Normalised rho (low level diversity component)
`norm_sub_alpha()`	Normalised subcommunity alpha diversity
`norm_sub_beta()`	Normalised subcommunity beta diversity
`norm_sub_rho()`	Normalised subcommunity rho diversity
`phy2branch()`	Phylogenetic similarity
`phy2dist()`	Phylogenetic pairwise tip distance matrix
`phy_abundance()`	Relative abundance of historical species
`phy_struct()`	Calculate phylogenetic structure matrix
`power_mean()`	Power mean of vector elements
`powermean-class`	powermean-class
`raw_alpha()`	Raw alpha (low level diversity component)
`raw_beta()`	Raw beta (low level diversity component)
`raw_gamma()`	Gamma (low level diversity component)
`raw_meta_alpha()`	Raw metacommunity alpha diversity
`raw_meta_beta()`	Raw metacommunity beta diversity
`raw_meta_rho()`	Raw metacommunity rho diversity
`raw_rho()`	Raw rho (low level diversity component)
`raw_sub_alpha()`	Raw subcommunity alpha diversity
`raw_sub_beta()`	Raw subcommunity beta diversity
`raw_sub_rho()`	Raw subcommunity rho diversity
`rdiversity` `rdiversity-package`	rdiversity: diversity measurement in R
`relativeentropy-class`	relativeentropy-class
`repartition()`	Repartition metacommunity
`show(<similarity>)`	similarity-class
`similarity()`	Generate similarity object
`sub_gamma()`	Subcommunity gamma diversity
`subdiv()`	Calculate subcommunity-level diversity
`tax2dist()`	Generate taxonomic distance matrix

Reference

All functions